Browse of TCMCG009C16052 protein

CDS

Accession Number	TCMCG009C16052
gbkey	CDS
Protein Id	XP_030501395.1
Location	complement(join(13754160..13754255,13754352..13755950,13757051..13758871,13759204..13759275,13759383..13759466,13759557..13759640,13759917..13760249))
Gene	LOC115716682
GeneID	115716682
Organism	Cannabis sativa

Protein

Length	1362aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA560384
db_source	XM_030645535.1
Definition	protein SHORTAGE IN CHIASMATA 1 isoform X2 [Cannabis sativa]

EGGNOG-MAPPER Annotation

COG_category	-
Description	-
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	-
KEGG_ko	-
EC	-
KEGG_Pathway	-
GOs	GO:0000003        [VIEW IN EMBL-EBI] GO:0000280        [VIEW IN EMBL-EBI] GO:0000712        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005911        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006259        [VIEW IN EMBL-EBI] GO:0006310        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0006996        [VIEW IN EMBL-EBI] GO:0007049        [VIEW IN EMBL-EBI] GO:0007059        [VIEW IN EMBL-EBI] GO:0007127        [VIEW IN EMBL-EBI] GO:0007131        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009506        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0022402        [VIEW IN EMBL-EBI] GO:0022414        [VIEW IN EMBL-EBI] GO:0030054        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0035825        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044260        [VIEW IN EMBL-EBI] GO:0045132        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0048285        [VIEW IN EMBL-EBI] GO:0051304        [VIEW IN EMBL-EBI] GO:0051307        [VIEW IN EMBL-EBI] GO:0051321        [VIEW IN EMBL-EBI] GO:0055044        [VIEW IN EMBL-EBI] GO:0061982        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0098813        [VIEW IN EMBL-EBI] GO:0140013        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1903046        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGCGAGCTCGTTTTCCCCACATTGATTACTTCCCCACCATTCCCTTTCAACTCCACGAAACCCTAACCTTCCTCCAACTCCCACTTTCTCAAGTCTCTCCCTCTCCTCCCCTTACCTCCACCTTCTCCGACCTCATCTTCCTCCGATCCGATTCCATCCCCGAACTCTCCCTTCCAATCGAAAATTTACCCATCCAAACTGCTCTTTCCAAGTTCTTCTCCAATGTTATTCCTCAGAAGATCGTCACCTCTGTCGAAGAATTCGAGGATGATGTTCCGTCATCGTGTCATAAAAGTTTCAATTCCAGAAGCCACGAGACTCATTTATCGGAGGATATTGGGGCTATTAACGAGGAAAAGGAAGTGGAGAGTTACAGAGCTTCTCAATCTGAAGTTGTTGAGGTGGAAGTTCTTAATAGTAATGCAGGTACTGTTGATGTTAACGTTCCACGACGATATGAAGTAATTGAATTTGAAACACCAGAGCTTGATGACTTCGTGGAAGCATCTTCATTCGTTGAAAACAAGGGGATCCTCATTCTTTCCGAGGTTCCAGAGATTGAAGAAAGTTTGGATATGCTCAATCCAGGACCTGCAACTTATTATCCTTATGAAGTTCACAAATCAGTTTTGACTGTCGAAGATATTGCCCTTGAGCATCCCATAGGGCAAAAAGATAATCCCCCCGAAGATTTCCAGGACCAGATTCACTTTAAAAAAGTAAATTTCCAAATTTTAGAAGTGGATGAAATAGTTCTGGAGCATATTGCAGACTTTTCTGTGAAGGAAAAGTTTCTTTCTATTATTGAAAATGCTGAACTGCAACATTTACAAACAGAAGGCCCGGAATTTAACAAGAAAGAGCTTTTGGGTTCTAAAGATTATGATGTATCAGGGTTTATATCAGACCATAGTCTATCCCCTCACTCTTGTGGATATGAGGTGGGATCCCTGGACAATTTCCCAGAAATAAACTTGATAAGTCTTGTCGAAATTTCACAGATTAGGATGAGCTCTGGAATTCAAAGGACATCAGATTGTGATTGTTTTGTGTCAGATAAACCATTTGTTTATCAGGAATTTCAAATCCTTGATGAGGACTCGTCTCAAATTTTTGAAGAACTCTTTAACAGACAAACAGTGTATGACACAGAGACTTGTGACTGGATGTTCAATGAAGACATGGACTTCAAGAATTTCAACAAATTAATTGTTAGTCATGAGCTAGCACTTGTAGACGACACATTCAAATCAATGCCCGTACCTGTTCTTTCTGATCATGGAAAACTGAGGTCAATCTACACAGTTATTAAAAGAAAACTTGCTCAACTAAAACCGCAGCCCTTATCTGCACTAGATGGAATATACTTGGACTGGCATATTCTTGAAGAAGTTAACTATGACCCTAACACTAGTATAAACTACGAGAGAGATTTGCATGATATGGGTTCATACAACATTGATTTTGGTTGGGATTCTTTTGGTGATACAAATGTGGTATATGATTTCATCTTCTCTGATGATGGTACATATGCATTTAATAAGGAGGAAAACGGAGAATCAAAGGAACTTCTCTCTAATGTCTCTATCCCTGTTGGAACCGAACCAAGAAAATTTTCAGGTGATAATTTCCCACAGCCGAAGAATGAAGAATGCTTGGCTAGAAAGAATGCTGAGAGGGCTTCATTATTATTCAAGTCTATGTCACATTCTAATGATCTTGATTTTCTCAGAAAAACTCAGAAAGTCACTACTGGAAAGAACAGTGAACCGACAGTTAAGACATTTGATAAAAATGCTACATCTCCCAAAGTTGCAGTGGGTAACTCAGTAGCAGATGTATCTCAAGGAGGGGAATCAATTAACTTTTCACATAGGGATGAGAATGTTAACAATCAGAAGTTCTTTCACCATCCCTCTAACCAGGAGAAACTCTTTGACTATCCATCTAATCAGGAAAAGTGTAATGTCAGATTTGAAGAGGCTGCAGATATTGTAGAAGCTTGCAGTATGCCTTCACTGGCTCCTTCTATGTCCTTTCCAGAAGAGTCTAATCACAGGAGCCCTCAAGAAAGCAGGTCATCTCTTCCCAAAACAGTGATACTTGTTAACACACAAAATCTTGATAAGGAAATGATAGTATCCAGAAGAAGTACCTATCAAAAAATTCTCGCAATAGAGAAACATGGTGCACAAGTTGTAGAACGTGATTCGGATTTACCCGTTGATGTTGTGATAAATTCTGCAATTTGTTTAGTTTGGTATGATTGCAGAAACATTGGAAAGAAAACAACTGCTGTGGATGAAGCTTCTTCAAGCTTACCCTTGTGCATTGAGAATATTGCAACAAATGTTTTGACCTCGCTGAGTTTCACTTTCAGTGGCTGTATTCTGGTCTTTGAGGGAGAAAACAGTTTCCTTTCTACTGTAATGGAATCCTCAGATGGACTTTATGCTGCAGCAGCAAGCCTTGGAATTGACGTGCAGCTCTTTTGTTCCTATTCATCTGAGTTGACTGATGAAATTATAATGAGCTGCATTGGATATGCCACTGGAGGTGTATATCCAAGAATGAATGAATCAGAAACACTTGCAGAGTCATTTCTTACAAAATTTCCTTCAGTCAATCCTTTGACTGCTCATGCAATTTTATCTTCGGGAGGCATGCTTATTGAGTTCCTGGAATGGTCAAACGAACGCAGGATTCACGCCCTCCAGAAATTTAATGTTCCTGTTGAAAGTATCAATTTGTTAGGTGCTTTATTGAAATATGGTGAGCGAGAGGATTCGAGATCAATAATGACAGACTATTCTTCTTCAGTCTCTTCTGGTATGGACTCTGAAAAATCTTCTAAAAGAAAAAGATGGAGCTACGACGATAGCCTTGACAACATTGACATCCGAATAGATGAATTGCACAATGATTCAGAAAAGCAATTTTCCAAAGAGACTATTAATACTTCTTCAGGGAAAAAACCATTCGAGCCATTCATGTCAAAAGATCATGACACATTTCGTCAGTTGAAAAACACAATACCATATGAGAGCAATTTGTTCCATCAAGAACAGGGATTTGATGAAGCTATGATGATGAATCATTTTGTTGTTCCAGAGCCATATGATTTTCAGATGCCTAAAGAATCTCAAAAGTTTAAGGAGACTAGGTTGTCAGGTCAACTACAGGGAACAAACGTGGATTTGCTGAAAAACTTTGATCTGCATGATATCAGCAGCTCTGATATTCTTTTTGCGGACCAAAAAGGTGAAGTCATTGACCTGACCGCAAGTCCTGCCCCAGGCAAAGAGTTTTCCTCTGTTGCCAACTCCTCATCGTTTTTTATGCCTGAAATGGAAAAGGATGGCATGAGAAAGTCCAGAACTGCTAGAAGATTATCCTTTGACAAAGACAATCAGCCTAAATTTCCAACTAGTGCAGAAATGTGCTCAGGTTCAAATATTTGGAATTTTGTAAAAGACCAGAAGAAGAATTTACATGTTGGAGCCAGCAATTCCTCAGATATAGATCTTGAAAATAATGCTACACCTTTAGACAAACGTAGCAAGCTATTAATGGATCGTCTCAAACACAGGTCTGCTGAAAAATCCCAAGGGTTACAATGCCAAGGGAGGAACTCGTCACTTCATGGAGACACTCCACTCTCACATGCGCTCCATTTGGCCAGTCCGCAACAAAAGTCTCCATGGACAATGGAGTTTCTTAACAAAATAAAGGAGAAGAGTAGATTTCGTCATCAGTCCCTTCCTTGTGAGACTGCTCCTTGTTTTGGGTGTTCGGGGGATGTATCAAAGGTTACCAAGCGAAGAAGCCCCTCAATTCTTGAATTTTTCAAGTACCAAGGAGGCAACAATATGAGGAAGATACCGGAACAAAAGAAACATAAGAGATCTACACAGTCAAGTTCATCAAAAGATGAAAAACCTTCTGCCTCTATTCTTCCAACATGGACACCTCTAGATAAAAGAGCACGGCAGACACTATCATTTGCAAATGACGGTAAAGGCCAAACTAAGCTCGTCTGGAATGATGAAATCCACAATCCGAGGAAAAAGTTTCTCCATCAAATATGA

Protein:   MRARFPHIDYFPTIPFQLHETLTFLQLPLSQVSPSPPLTSTFSDLIFLRSDSIPELSLPIENLPIQTALSKFFSNVIPQKIVTSVEEFEDDVPSSCHKSFNSRSHETHLSEDIGAINEEKEVESYRASQSEVVEVEVLNSNAGTVDVNVPRRYEVIEFETPELDDFVEASSFVENKGILILSEVPEIEESLDMLNPGPATYYPYEVHKSVLTVEDIALEHPIGQKDNPPEDFQDQIHFKKVNFQILEVDEIVLEHIADFSVKEKFLSIIENAELQHLQTEGPEFNKKELLGSKDYDVSGFISDHSLSPHSCGYEVGSLDNFPEINLISLVEISQIRMSSGIQRTSDCDCFVSDKPFVYQEFQILDEDSSQIFEELFNRQTVYDTETCDWMFNEDMDFKNFNKLIVSHELALVDDTFKSMPVPVLSDHGKLRSIYTVIKRKLAQLKPQPLSALDGIYLDWHILEEVNYDPNTSINYERDLHDMGSYNIDFGWDSFGDTNVVYDFIFSDDGTYAFNKEENGESKELLSNVSIPVGTEPRKFSGDNFPQPKNEECLARKNAERASLLFKSMSHSNDLDFLRKTQKVTTGKNSEPTVKTFDKNATSPKVAVGNSVADVSQGGESINFSHRDENVNNQKFFHHPSNQEKLFDYPSNQEKCNVRFEEAADIVEACSMPSLAPSMSFPEESNHRSPQESRSSLPKTVILVNTQNLDKEMIVSRRSTYQKILAIEKHGAQVVERDSDLPVDVVINSAICLVWYDCRNIGKKTTAVDEASSSLPLCIENIATNVLTSLSFTFSGCILVFEGENSFLSTVMESSDGLYAAAASLGIDVQLFCSYSSELTDEIIMSCIGYATGGVYPRMNESETLAESFLTKFPSVNPLTAHAILSSGGMLIEFLEWSNERRIHALQKFNVPVESINLLGALLKYGEREDSRSIMTDYSSSVSSGMDSEKSSKRKRWSYDDSLDNIDIRIDELHNDSEKQFSKETINTSSGKKPFEPFMSKDHDTFRQLKNTIPYESNLFHQEQGFDEAMMMNHFVVPEPYDFQMPKESQKFKETRLSGQLQGTNVDLLKNFDLHDISSSDILFADQKGEVIDLTASPAPGKEFSSVANSSSFFMPEMEKDGMRKSRTARRLSFDKDNQPKFPTSAEMCSGSNIWNFVKDQKKNLHVGASNSSDIDLENNATPLDKRSKLLMDRLKHRSAEKSQGLQCQGRNSSLHGDTPLSHALHLASPQQKSPWTMEFLNKIKEKSRFRHQSLPCETAPCFGCSGDVSKVTKRRSPSILEFFKYQGGNNMRKIPEQKKHKRSTQSSSSKDEKPSASILPTWTPLDKRARQTLSFANDGKGQTKLVWNDEIHNPRKKFLHQI